Methods: Cell Model Passports (CMP)

Samples: Human cancer cell lines

Techniques: RNA-seq

Data processing for CellPalmSeq: Data were downloaded from (file and grouped by ‘cancer type’.

Heatmap units: Transcripts per million (TPM)

References: Garcia-Alonso, L. et al. (2017) ‘Transcription Factor Activities Enhance Markers of Drug Sensitivity in Cancer.’, Cancer Research. American Association for Cancer Research Inc., 78(3), pp. 769–780. doi: 10.1158/0008-5472.CAN-17-1679.

Picco, G. et al. (2019) ‘Functional linkage of gene fusions to cancer cell fitness assessed by pharmacological and CRISPR-Cas9 screening’, Nature Communications 2019 10:1. Nature Publishing Group, 10(1), pp. 1–12. doi: 10.1038/s41467-019-09940-1.


Original data availability: