Methods: Cancer Cell Line Encyclopedia (CCLE)

Samples: Human cancer cell lines

Techniques: RNA-seq

Data processing for CellPalmSeq: Data were downloaded from  (file CCLE_expression.csv version 22Q2) and grouped by ‘primary disease’.

Heatmap units: Transcripts per million (TPM)

References: Ghandi, M. et al. (2019) ‘Next-generation characterization of the Cancer Cell Line Encyclopedia’, Nature 2019 569:7757. Nature Publishing Group, 569(7757), pp. 503–508. doi: 10.1038/s41586-019-1186-3.


Original data availability: